ThinkingRock Forum

Hello,

I have used TR for several weeks now, and currently I cannot access my data anymore.
Since I upgraded to hardy, batik seems to be missing, I could only find a source package for it which I was unable to compile. TR starts but there are no UI items apart from menu and shortcut bar.

I made a fresh gutsy install in a virtual machine to try it there, but things are even worse: the first uncaught exceptions I see there are null pointer dereference and a "sealing exception", if I remember correctly. TR just hangs in the splash screen.

Please, someone help me out of here! Priority one would be to get me access to my data again. I painfully made the experience WHY it's called a trusted system...

Is it any of these problems:

http://thinkingrock.com.au/forum/viewtopic.php?t=1832
http://thinkingrock.com.au/forum/viewtopic.php?t=1846
http://thinkingrock.com.au/forum/viewtopic.php?t=1628

_________________
ThinkingRock Developer

In short, no.

I looked at all of these threads beforehand.
I do NOT have compiz enabled, I have sun-java 6 and not 5 (at least on hardy), I do not see any permission denied's nor lock file problems.

I can post the terminal output (on gutsy it's VERY long) here as soon as I'm at home.

Argh. It works now on hardy, and I didn't change anything (I don't remember whether I did some package upgrades, hardy is still moving rapidly these days). I hate that because it makes me look like an idiot...

I also realized that batik is not missing because it's shipped with TR.

Below is a (reduced) transcript on gutsy, for completeness.

>Log Session: Monday April 28, 2008 AD 5:22:51;658 o'clock PM GMT+02:00

>System Info:

Product Version = ThinkingRock 2.0 Epsilon

Operating System = Linux version 2.6.22-14-generic running on i386

Java; VM; Vendor; Home = 1.5.0; GNU libgcj 4.2.1 (Ubuntu 4.2.1-5ubuntu5); Free Software Foundation, Inc.; /usr/lib/jvm/java-1.5.0-gcj-4.2-1.5.0.0/jre

System Locale; Encoding = de_DE (thinkingrock); UTF-8

Home Dir.; Current Dir. = /home/thomas; /home/thomas

Installation; User Dir. = /home/thomas/Desktop/tr-2.0.epsilon/thinkingrock:/home/thomas/Desktop/tr-2.0.epsilon/ide7:/home/thomas/Desktop/tr-2.0.epsilon/platform6; /home/thomas/.thinkingrock/dev

Boot & Ext. Classpath = /usr/lib/jvm/java-1.5.0-gcj-4.2-1.5.0.0/jre/lib/rt.jar

Application Classpath = /home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/boot.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/org-openide-modules.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/org-openide-util.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/boot_ja.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/boot_pt_BR.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/boot_zh_CN.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/org-openide-modules_ja.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/org-openide-modules_pt_BR.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/org-openide-modules_zh_CN.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/org-openide-util_ja.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/org-openide-util_pt_BR.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/lib/locale/org-openide-util_zh_CN.jar

Startup Classpath = /home/thomas/Desktop/tr-2.0.epsilon/platform6/core/core.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/core/org-openide-filesystems.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/core/locale/core_zh_CN.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/core/locale/org-openide-filesystems_pt_BR.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/core/locale/org-openide-filesystems_ja.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/core/locale/org-openide-filesystems_zh_CN.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/core/locale/core_pt_BR.jar:/home/thomas/Desktop/tr-2.0.epsilon/platform6/core/locale/core_ja.jar:/home/thomas/Desktop/tr-2.0.epsilon/thinkingrock/core/locale/core_thinkingrock.jar

-------------------------------------------------------------------------------

[org.netbeans.core.projects] INFORMATIONAL *********** Exception occurred ************ at 5:22 PM on 28-Apr-08

java.io.IOException: org.xml.sax.SAXException: filesystem

at org.netbeans.core.startup.layers.ParsingLayerCacheManager.createRoot(ParsingLayerCacheManager.java:162)

at org.netbeans.core.startup.layers.ParsingLayerCacheManager.store(ParsingLayerCacheManager.java:108)

[catch] at org.netbeans.core.startup.layers.ModuleLayeredFileSystem$1.run(ModuleLayeredFileSystem.java:259)

at org.openide.filesystems.EventControl.runAtomicAction(EventControl.java:102)

at org.openide.filesystems.FileSystem.runAtomicAction(FileSystem.java:456)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.setURLs(ModuleLayeredFileSystem.java:247)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.addURLs(ModuleLayeredFileSystem.java:320)

at org.netbeans.core.startup.NbInstaller.loadLayers(NbInstaller.java:554)

at org.netbeans.core.startup.NbInstaller.load(NbInstaller.java:243)

at org.netbeans.ModuleManager.enable(ModuleManager.java:904)

at org.netbeans.core.startup.ModuleList.installNew(ModuleList.java:383)

at org.netbeans.core.startup.ModuleList.trigger(ModuleList.java:317)

at org.netbeans.core.startup.ModuleSystem.restore(ModuleSystem.java:250)

at org.netbeans.core.startup.Main.getModuleSystem(Main.java:210)

at org.netbeans.core.startup.Main.start(Main.java:381)

at org.netbeans.core.startup.TopThreadGroup.run(TopThreadGroup.java:96)

at java.lang.Thread.run(libgcj.so.81)

***cut out plenty of these here***
==>

org.xml.sax.SAXException: filesystem

at org.netbeans.core.startup.layers.ParsingLayerCacheManager.startElement(ParsingLayerCacheManager.java:264)

at gnu.xml.stream.SAXParser.parse(libgcj.so.81)

at gnu.xml.stream.SAXParser.parse(libgcj.so.81)

at org.netbeans.core.startup.layers.ParsingLayerCacheManager.createRoot(ParsingLayerCacheManager.java:144)

at org.netbeans.core.startup.layers.ParsingLayerCacheManager.store(ParsingLayerCacheManager.java:108)

[catch] at org.netbeans.core.startup.layers.ModuleLayeredFileSystem$1.run(ModuleLayeredFileSystem.java:259)

at org.openide.filesystems.EventControl.runAtomicAction(EventControl.java:102)

at org.openide.filesystems.FileSystem.runAtomicAction(FileSystem.java:456)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.setURLs(ModuleLayeredFileSystem.java:247)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.addURLs(ModuleLayeredFileSystem.java:320)

at org.netbeans.core.startup.NbInstaller.loadLayers(NbInstaller.java:554)

at org.netbeans.core.startup.NbInstaller.load(NbInstaller.java:243)

at org.netbeans.ModuleManager.enable(ModuleManager.java:904)

at org.netbeans.core.startup.ModuleList.installNew(ModuleList.java:383)

at org.netbeans.core.startup.ModuleList.trigger(ModuleList.java:317)

at org.netbeans.core.startup.ModuleSystem.restore(ModuleSystem.java:250)

at org.netbeans.core.startup.Main.getModuleSystem(Main.java:210)

at org.netbeans.core.startup.Main.start(Main.java:381)

at org.netbeans.core.startup.TopThreadGroup.run(TopThreadGroup.java:96)

at java.lang.Thread.run(libgcj.so.81)

[org.netbeans.core.projects] *********** Exception occurred ************ at 5:23 PM on 28-Apr-08

java.io.IOException: null: java.lang.NullPointerException

at org.openide.filesystems.XMLFileSystem.setXmlUrls(XMLFileSystem.java:306)

at org.openide.filesystems.XMLFileSystem.setXmlUrls(XMLFileSystem.java:242)

at org.netbeans.core.startup.layers.NonCacheManager.store(NonCacheManager.java:63)

[catch] at org.netbeans.core.startup.layers.ModuleLayeredFileSystem$1.run(ModuleLayeredFileSystem.java:272)

at org.openide.filesystems.EventControl.runAtomicAction(EventControl.java:102)

at org.openide.filesystems.FileSystem.runAtomicAction(FileSystem.java:456)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.setURLs(ModuleLayeredFileSystem.java:247)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.addURLs(ModuleLayeredFileSystem.java:320)

at org.netbeans.core.startup.NbInstaller.loadLayers(NbInstaller.java:554)

at org.netbeans.core.startup.NbInstaller.load(NbInstaller.java:243)

at org.netbeans.ModuleManager.enable(ModuleManager.java:904)

at org.netbeans.core.startup.ModuleList.installNew(ModuleList.java:383)

at org.netbeans.core.startup.ModuleList.trigger(ModuleList.java:317)

at org.netbeans.core.startup.ModuleSystem.restore(ModuleSystem.java:250)

at org.netbeans.core.startup.Main.getModuleSystem(Main.java:210)

at org.netbeans.core.startup.Main.start(Main.java:381)

at org.netbeans.core.startup.TopThreadGroup.run(TopThreadGroup.java:96)

at java.lang.Thread.run(libgcj.so.81)

Caused by: java.lang.NullPointerException

at org.openide.filesystems.XMLFileSystem.setXmlUrls(XMLFileSystem.java:287)

...17 more

java.lang.SecurityException: sealing violation

at org.netbeans.JarClassLoader.simpleFindClass(JarClassLoader.java:159)

at org.netbeans.ProxyClassLoader.fullFindClass(ProxyClassLoader.java:598)

at org.netbeans.ProxyClassLoader.loadInOrder(ProxyClassLoader.java:558)

at org.netbeans.ProxyClassLoader.smartLoadClass(ProxyClassLoader.java:531)

at org.netbeans.ProxyClassLoader.loadClass(ProxyClassLoader.java:163)

at java.lang.ClassLoader.loadClass(libgcj.so.81)

at java.lang.Class.initializeClass(libgcj.so.81)

at org.netbeans.core.NotifyException.notify(NotifyException.java:208)

at org.netbeans.core.NbErrorManager.notify(NbErrorManager.java:238)

at org.openide.ErrorManager$DelegatingErrorManager.notify(ErrorManager.java:579)

at org.openide.ErrorManager.notify(ErrorManager.java:323)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem$1.run(ModuleLayeredFileSystem.java:279)

at org.openide.filesystems.EventControl.runAtomicAction(EventControl.java:102)

at org.openide.filesystems.FileSystem.runAtomicAction(FileSystem.java:456)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.setURLs(ModuleLayeredFileSystem.java:247)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.addURLs(ModuleLayeredFileSystem.java:320)

at org.netbeans.core.startup.NbInstaller.loadLayers(NbInstaller.java:554)

at org.netbeans.core.startup.NbInstaller.load(NbInstaller.java:243)

at org.netbeans.ModuleManager.enable(ModuleManager.java:904)

at org.netbeans.core.startup.ModuleList.installNew(ModuleList.java:383)

at org.netbeans.core.startup.ModuleList.trigger(ModuleList.java:317)

at org.netbeans.core.startup.ModuleSystem.restore(ModuleSystem.java:250)

at org.netbeans.core.startup.Main.getModuleSystem(Main.java:210)

at org.netbeans.core.startup.Main.start(Main.java:381)

at org.netbeans.core.startup.TopThreadGroup.run(TopThreadGroup.java:96)

at java.lang.Thread.run(libgcj.so.81)

java.io.IOException: null: java.lang.NullPointerException

at org.openide.filesystems.XMLFileSystem.setXmlUrls(XMLFileSystem.java:306)

at org.openide.filesystems.XMLFileSystem.setXmlUrls(XMLFileSystem.java:242)

at org.netbeans.core.startup.layers.NonCacheManager.store(NonCacheManager.java:63)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem$1.run(ModuleLayeredFileSystem.java:272)

at org.openide.filesystems.EventControl.runAtomicAction(EventControl.java:102)

at org.openide.filesystems.FileSystem.runAtomicAction(FileSystem.java:456)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.setURLs(ModuleLayeredFileSystem.java:247)

at org.netbeans.core.startup.layers.ModuleLayeredFileSystem.addURLs(ModuleLayeredFileSystem.java:320)

at org.netbeans.core.startup.NbInstaller.loadLayers(NbInstaller.java:554)

at org.netbeans.core.startup.NbInstaller.load(NbInstaller.java:243)

at org.netbeans.ModuleManager.enable(ModuleManager.java:904)

at org.netbeans.core.startup.ModuleList.installNew(ModuleList.java:383)

at org.netbeans.core.startup.ModuleList.trigger(ModuleList.java:317)

at org.netbeans.core.startup.ModuleSystem.restore(ModuleSystem.java:250)

at org.netbeans.core.startup.Main.getModuleSystem(Main.java:210)

at org.netbeans.core.startup.Main.start(Main.java:381)

at org.netbeans.core.startup.TopThreadGroup.run(TopThreadGroup.java:96)

at java.lang.Thread.run(libgcj.so.81)

Caused by: java.lang.NullPointerException

at org.openide.filesystems.XMLFileSystem.setXmlUrls(XMLFileSystem.java:287)

...17 more

Here it stops and I have to hit ^C.

NB phpBB's syntax rules are not really good for posting logs ^^

Ok. One thing I noticed in the log, TR is using a Java 1.5 version on your system.

To change this edit the TR config file:
<install_dir>/etc/thinkingrock.conf file and change the line:

#jdkhome="/path/to/jdk"

remove the # and set the Java path, e.g.

jdkhome="/opt/java/jre1.6.0_01"

Fine. I installed sun-java6 and it works now in Gutsy as well.
Neither sun-java5 nor 6 was installed...

Thanks and sorry for the "false alarm",
Thomas